HCSGD entry for SSPN
1. General information
| Official gene symbol | SSPN |
|---|---|
| Entrez ID | 8082 |
| Gene full name | sarcospan |
| Other gene symbols | DAGA5 KRAG NSPN SPN1 SPN2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005887 | Integral component of plasma membrane | TAS | cellular_component |
| GO:0006936 | Muscle contraction | TAS | biological_process |
| GO:0007155 | Cell adhesion | TAS | biological_process |
| GO:0016010 | Dystrophin-associated glycoprotein complex | TAS | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0030054 | Cell junction | IEA | cellular_component |
| GO:0030133 | Transport vesicle | IDA | cellular_component |
| GO:0042383 | Sarcolemma | IEA | cellular_component |
| GO:0045211 | Postsynaptic membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9581024391 | 0.0037484556 | 0.9999902473 | 0.1242608312 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -1.2922752950 |
| GSE13712_SHEAR | Up | 0.0829417174 |
| GSE13712_STATIC | Up | 0.1327824012 |
| GSE19018 | Down | -0.1818785694 |
| GSE19899_A1 | Down | -0.5325547194 |
| GSE19899_A2 | Down | -1.3618942336 |
| PubMed_21979375_A1 | Down | -1.2745255072 |
| PubMed_21979375_A2 | Down | -1.4617812330 |
| GSE35957 | Down | -0.9701906466 |
| GSE36640 | Down | -0.5915404356 |
| GSE54402 | Down | -1.5451872843 |
| GSE9593 | Down | -0.0622778377 |
| GSE43922 | Down | -1.0362479376 |
| GSE24585 | Up | 0.4353517367 |
| GSE37065 | Down | -0.1392743647 |
| GSE28863_A1 | Up | 0.0558533182 |
| GSE28863_A2 | Up | 0.1980928259 |
| GSE28863_A3 | Down | -0.0858099978 |
| GSE28863_A4 | Up | 0.0494296697 |
| GSE48662 | Up | 0.2027439449 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018051 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
