HCSGD entry for LIMD2
1. General information
| Official gene symbol | LIMD2 |
|---|---|
| Entrez ID | 80774 |
| Gene full name | LIM domain containing 2 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8277137875 | 0.1663263516 | 0.9999902473 | 0.7890918452 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1581078473 |
| GSE13712_SHEAR | Up | 0.3502180674 |
| GSE13712_STATIC | Up | 0.4586304317 |
| GSE19018 | Down | -0.2833831029 |
| GSE19899_A1 | Down | -0.0532680993 |
| GSE19899_A2 | Up | 0.0458217241 |
| PubMed_21979375_A1 | Down | -0.2283232119 |
| PubMed_21979375_A2 | Down | -0.2092009296 |
| GSE35957 | Down | -0.1328251571 |
| GSE36640 | Down | -0.8578785708 |
| GSE54402 | Up | 0.0028935725 |
| GSE9593 | Down | -0.2478457764 |
| GSE43922 | Up | 0.0487270768 |
| GSE24585 | Up | 0.2384886255 |
| GSE37065 | Down | -0.0935182714 |
| GSE28863_A1 | Down | -0.2413020847 |
| GSE28863_A2 | Down | -0.2277361944 |
| GSE28863_A3 | Up | 0.2924327271 |
| GSE28863_A4 | Down | -0.0118646690 |
| GSE48662 | Up | 0.0607468694 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-375 | MIMAT0000728 | MIRT020001 | Microarray | Functional MTI (Weak) | 20215506 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT023120 | Microarray | Functional MTI (Weak) | 18668037 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
