HCSGD entry for SLC19A3

1. General information

Official gene symbolSLC19A3
Entrez ID80704
Gene full namesolute carrier family 19, member 3
Other gene symbolsBBGD THMD2 THTR2
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005886Plasma membraneTAScellular_component
GO:0006766Vitamin metabolic processTASbiological_process
GO:0006767Water-soluble vitamin metabolic processTASbiological_process
GO:0006810TransportIEAbiological_process
GO:0006855Drug transmembrane transportISSbiological_process
GO:0015403Thiamine uptake transmembrane transporter activityIEA ISSmolecular_function
GO:0016020MembraneIEAcellular_component
GO:0016021Integral component of membraneNAScellular_component
GO:0035461Vitamin transmembrane transportISSbiological_process
GO:0042723Thiamine-containing compound metabolic processTASbiological_process
GO:0044281Small molecule metabolic processTASbiological_process
GO:0055085Transmembrane transportISSbiological_process
GO:0071934Thiamine transmembrane transportISSbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.32922092250.90314826560.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0589602506
GSE13712_SHEARUp0.0345682039
GSE13712_STATICUp0.1275097080
GSE19018Up0.1428801813
GSE19899_A1Up0.1379104206
GSE19899_A2Up0.0627133279
PubMed_21979375_A1Up0.0701957354
PubMed_21979375_A2Down-0.0504975152
GSE35957Down-0.0015061160
GSE36640Down-0.0677413113
GSE54402Up0.0571177121
GSE9593Up0.6969050813
GSE43922Up0.0157315334
GSE24585Down-0.0058530516
GSE37065Up0.4968984217
GSE28863_A1Down-0.0171127258
GSE28863_A2Up0.1179720127
GSE28863_A3Up0.1031532672
GSE28863_A4Up0.0783069074
GSE48662Up0.0526943809

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Name

Drug

Accession number

L-CysteineDB00151 NUTR00018 | DB04443

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-98-5pMIMAT0000096MIRT027742MicroarrayFunctional MTI (Weak)19088304
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.