HCSGD entry for ABTB1
1. General information
| Official gene symbol | ABTB1 |
|---|---|
| Entrez ID | 80325 |
| Gene full name | ankyrin repeat and BTB (POZ) domain containing 1 |
| Other gene symbols | BPOZ BTB3 BTBD21 EF1ABP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003746 | Translation elongation factor activity | IEA | molecular_function |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005886 | Plasma membrane | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3307277535 | 0.9001868774 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0641355266 |
| GSE13712_SHEAR | Up | 0.0516296826 |
| GSE13712_STATIC | Down | -0.1667389080 |
| GSE19018 | Up | 0.0377635389 |
| GSE19899_A1 | Down | -0.0447062322 |
| GSE19899_A2 | Up | 0.2134955201 |
| PubMed_21979375_A1 | Up | 0.0319131441 |
| PubMed_21979375_A2 | Up | 0.0236611135 |
| GSE35957 | Up | 0.1882305136 |
| GSE36640 | Up | 0.1128358733 |
| GSE54402 | Up | 0.1962646934 |
| GSE9593 | Up | 0.1085151264 |
| GSE43922 | Up | 0.0510290212 |
| GSE24585 | Up | 0.5376300786 |
| GSE37065 | Up | 0.0208025477 |
| GSE28863_A1 | Up | 0.0869347184 |
| GSE28863_A2 | Up | 0.0392541096 |
| GSE28863_A3 | Down | -0.0414883760 |
| GSE28863_A4 | Down | -0.2562651337 |
| GSE48662 | Up | 0.4778607347 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-125b-5p | MIMAT0000423 | MIRT006910 | Luciferase reporter assay | Functional MTI | 22689670 |
| hsa-miR-335-5p | MIMAT0000765 | MIRT017403 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
