HCSGD entry for PDGFD

1. General information

Official gene symbolPDGFD
Entrez ID80310
Gene full nameplatelet derived growth factor D
Other gene symbolsIEGF SCDGF-B SCDGFB
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000139Golgi membraneTAScellular_component
GO:0005161Platelet-derived growth factor receptor bindingIEAmolecular_function
GO:0005576Extracellular regionTAScellular_component
GO:0005788Endoplasmic reticulum lumenTAScellular_component
GO:0007275Multicellular organismal developmentIEAbiological_process
GO:0008083Growth factor activityIEAmolecular_function
GO:0048008Platelet-derived growth factor receptor signaling pathwayIEAbiological_process
GO:0050730Regulation of peptidyl-tyrosine phosphorylationIEAbiological_process
GO:0051781Positive regulation of cell divisionIEAbiological_process
GO:0071230Cellular response to amino acid stimulusIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.89915459900.00047909650.99999024730.0410707792

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0559280724
GSE13712_SHEARDown-2.2487781865
GSE13712_STATICDown-1.1971350397
GSE19018Down-1.8032672664
GSE19899_A1Down-0.2337795458
GSE19899_A2Down-3.9379800913
PubMed_21979375_A1Down-0.6890990714
PubMed_21979375_A2Down-1.0812365726
GSE35957Down-0.1547056540
GSE36640Down-0.2059307474
GSE54402Down-1.9635842855
GSE9593Up0.2046370203
GSE43922Down-0.7980354388
GSE24585Down-0.2289841573
GSE37065Down-0.5885125008
GSE28863_A1Up0.6545677321
GSE28863_A2Up0.2770605286
GSE28863_A3Up0.5895817648
GSE28863_A4Down-0.1932273227
GSE48662Down-0.1905305593

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Name

Drug

Accession number

CR002DB05139 -
MLN-518DB05465 -

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-21-5pMIMAT0000076MIRT030746MicroarrayFunctional MTI (Weak)18591254
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.