HCSGD entry for SCUBE1
1. General information
| Official gene symbol | SCUBE1 |
|---|---|
| Entrez ID | 80274 |
| Gene full name | signal peptide, CUB domain, EGF-like 1 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005509 | Calcium ion binding | IEA TAS | molecular_function |
| GO:0005615 | Extracellular space | IDA | cellular_component |
| GO:0006954 | Inflammatory response | NAS | biological_process |
| GO:0007512 | Adult heart development | NAS | biological_process |
| GO:0007596 | Blood coagulation | NAS | biological_process |
| GO:0009791 | Post-embryonic development | NAS | biological_process |
| GO:0009897 | External side of plasma membrane | IDA | cellular_component |
| GO:0009986 | Cell surface | IDA | cellular_component |
| GO:0019897 | Extrinsic component of plasma membrane | IDA | cellular_component |
| GO:0042802 | Identical protein binding | IDA | molecular_function |
| GO:0045446 | Endothelial cell differentiation | NAS | biological_process |
| GO:0046982 | Protein heterodimerization activity | IDA | molecular_function |
| GO:0051260 | Protein homooligomerization | IPI | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4328365412 | 0.5337741917 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0028883788 |
| GSE13712_SHEAR | Down | -0.0738140452 |
| GSE13712_STATIC | Up | 0.1315771820 |
| GSE19018 | Down | -0.0173396964 |
| GSE19899_A1 | Down | -0.2406756925 |
| GSE19899_A2 | Up | 0.2546965639 |
| PubMed_21979375_A1 | Up | 0.0571586166 |
| PubMed_21979375_A2 | Down | -0.4458944814 |
| GSE35957 | Up | 0.0088337924 |
| GSE36640 | Up | 0.0842260772 |
| GSE54402 | Down | -0.1372584901 |
| GSE9593 | Up | 0.4129056701 |
| GSE43922 | Up | 0.0017182065 |
| GSE24585 | Down | -0.0587362989 |
| GSE37065 | Down | -0.0632268669 |
| GSE28863_A1 | Down | -0.1737818611 |
| GSE28863_A2 | Up | 0.0049131332 |
| GSE28863_A3 | Up | 0.0667426126 |
| GSE28863_A4 | Up | 0.0974263029 |
| GSE48662 | Up | 0.8540129311 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
