HCSGD entry for LRRTM4

1. General information

Official gene symbolLRRTM4
Entrez ID80059
Gene full nameleucine rich repeat transmembrane neuronal 4
Other gene symbols
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0030054Cell junctionIEAcellular_component
GO:0032281Alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complexIEAcellular_component
GO:0045211Postsynaptic membraneIEAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.28391287570.72991636340.98288449301.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0404946805
GSE13712_SHEARDown-0.2008093484
GSE13712_STATICDown-0.2574641662
GSE19018Down-0.1716164643
GSE19899_A1Up0.1561408467
GSE19899_A2Down-0.0003618821
PubMed_21979375_A1Down-0.0074599327
PubMed_21979375_A2Up0.0733154947
GSE35957Up0.1166947367
GSE36640Up0.0347689199
GSE54402Up0.0898115027
GSE9593Up0.0645476182
GSE43922Up0.0095211165
GSE24585Up1.7540931449
GSE37065Up0.0755943047
GSE28863_A1Down-0.1332285902
GSE28863_A2Up0.1308143870
GSE28863_A3Up0.0088703867
GSE28863_A4Up0.0510045224
GSE48662Down-0.0159572707

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.