HCSGD entry for ZNF556
1. General information
| Official gene symbol | ZNF556 |
|---|---|
| Entrez ID | 80032 |
| Gene full name | zinc finger protein 556 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005622 | Intracellular | IEA | cellular_component |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6324209225 | 0.6090858934 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0458996351 |
| GSE13712_SHEAR | Up | 0.0847315397 |
| GSE13712_STATIC | Up | 0.2023082288 |
| GSE19018 | Up | 0.2028724479 |
| GSE19899_A1 | Down | -0.0482434930 |
| GSE19899_A2 | Up | 0.2336604389 |
| PubMed_21979375_A1 | Down | -0.1176263877 |
| PubMed_21979375_A2 | Down | -0.3186110105 |
| GSE35957 | Down | -0.0255304734 |
| GSE36640 | Down | -0.0609050404 |
| GSE54402 | Down | -0.0260832651 |
| GSE9593 | Down | -0.0977698508 |
| GSE43922 | Up | 0.0102069328 |
| GSE24585 | Down | -0.0251542671 |
| GSE37065 | Down | -0.0296725151 |
| GSE28863_A1 | Down | -0.0355432102 |
| GSE28863_A2 | Up | 0.2169168063 |
| GSE28863_A3 | Down | -0.3686035145 |
| GSE28863_A4 | Up | 0.2052609458 |
| GSE48662 | Up | 0.0532936436 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT028958 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
