HCSGD entry for SEMA6D
1. General information
| Official gene symbol | SEMA6D |
|---|---|
| Entrez ID | 80031 |
| Gene full name | sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004872 | Receptor activity | IEA | molecular_function |
| GO:0005794 | Golgi apparatus | IDA | cellular_component |
| GO:0005886 | Plasma membrane | IDA TAS | cellular_component |
| GO:0007275 | Multicellular organismal development | IEA | biological_process |
| GO:0007411 | Axon guidance | TAS | biological_process |
| GO:0014911 | Positive regulation of smooth muscle cell migration | IEA | biological_process |
| GO:0014912 | Negative regulation of smooth muscle cell migration | IEA | biological_process |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0021591 | Ventricular system development | IEA | biological_process |
| GO:0030215 | Semaphorin receptor binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0020766954 | 0.2920701911 | 0.1228330337 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0176503484 |
| GSE13712_SHEAR | Down | -0.5977825616 |
| GSE13712_STATIC | Down | -0.6646552601 |
| GSE19018 | Up | 1.5729497717 |
| GSE19899_A1 | Up | 1.1359861886 |
| GSE19899_A2 | Up | 2.0567530947 |
| PubMed_21979375_A1 | Up | 1.5609828775 |
| PubMed_21979375_A2 | Up | 2.1717987504 |
| GSE35957 | Down | -0.0992139138 |
| GSE36640 | Up | 1.9016943562 |
| GSE54402 | Up | 1.7640986670 |
| GSE9593 | Up | 0.0074964753 |
| GSE43922 | Up | 0.5993727032 |
| GSE24585 | Down | -0.4397830336 |
| GSE37065 | Down | -0.3062890083 |
| GSE28863_A1 | Down | -0.3065667226 |
| GSE28863_A2 | Down | -0.5229838997 |
| GSE28863_A3 | Up | 0.0687163677 |
| GSE28863_A4 | Down | -0.0425342032 |
| GSE48662 | Up | 0.0518913469 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
