HCSGD entry for FAM188A
1. General information
| Official gene symbol | FAM188A |
|---|---|
| Entrez ID | 80013 |
| Gene full name | family with sequence similarity 188, member A |
| Other gene symbols | C10orf97 CARP DERP5 MST126 RP11-394I23.1 my042 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0006915 | Apoptotic process | IEA | biological_process |
| GO:0031965 | Nuclear membrane | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4905833631 | 0.1528088446 | 0.9999902473 | 0.7548951952 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0002625488 |
| GSE13712_SHEAR | Up | 0.2393022335 |
| GSE13712_STATIC | Up | 0.1426871355 |
| GSE19018 | Down | -0.3515551239 |
| GSE19899_A1 | Down | -0.2011430907 |
| GSE19899_A2 | Down | -0.3891467897 |
| PubMed_21979375_A1 | Up | 0.7222615504 |
| PubMed_21979375_A2 | Down | -0.3555544566 |
| GSE35957 | Up | 0.0481890239 |
| GSE36640 | Up | 0.5637159294 |
| GSE54402 | Down | -0.0654555225 |
| GSE9593 | Up | 0.3328815436 |
| GSE43922 | Up | 0.0505777910 |
| GSE24585 | Up | 0.2756054617 |
| GSE37065 | Up | 0.2249401337 |
| GSE28863_A1 | Down | -0.2647014801 |
| GSE28863_A2 | Down | -0.1187841793 |
| GSE28863_A3 | Down | -0.7773031969 |
| GSE28863_A4 | Down | -0.0322396103 |
| GSE48662 | Down | -0.4500585908 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-183-5p | MIMAT0000261 | MIRT047032 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
