HCSGD entry for ATAT1
1. General information
| Official gene symbol | ATAT1 |
|---|---|
| Entrez ID | 79969 |
| Gene full name | alpha tubulin acetyltransferase 1 |
| Other gene symbols | C6orf134 MEC17 Nbla00487 TAT |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0019799 | Tubulin N-acetyltransferase activity | IMP | molecular_function |
| GO:0048666 | Neuron development | IEA | biological_process |
| GO:0070507 | Regulation of microtubule cytoskeleton organization | IEA | biological_process |
| GO:0071929 | Alpha-tubulin acetylation | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9427107557 | 0.2732451161 | 0.9999902473 | 0.9994559061 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0156259652 |
| GSE13712_SHEAR | Down | -0.2546267070 |
| GSE13712_STATIC | Down | -0.1677620301 |
| GSE19018 | Down | -0.0778899594 |
| GSE19899_A1 | Down | -0.0866743912 |
| GSE19899_A2 | Down | -0.3160887230 |
| PubMed_21979375_A1 | Up | 0.1600452397 |
| PubMed_21979375_A2 | Down | -0.1121462109 |
| GSE35957 | Down | -0.2700768386 |
| GSE36640 | Down | -0.1607494297 |
| GSE54402 | Up | 0.1035006839 |
| GSE9593 | Down | -0.2845400261 |
| GSE43922 | Up | 0.0535117395 |
| GSE24585 | Up | 0.1049113970 |
| GSE37065 | Up | 0.0754895765 |
| GSE28863_A1 | Down | -0.1256484983 |
| GSE28863_A2 | Up | 0.0364573612 |
| GSE28863_A3 | Up | 0.1186735147 |
| GSE28863_A4 | Down | -0.0892598582 |
| GSE48662 | Down | -0.0887734169 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029620 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-296-3p | MIMAT0004679 | MIRT038440 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-100-5p | MIMAT0000098 | MIRT048434 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-23a-3p | MIMAT0000078 | 1 | hsa-miR-23a | 15131085 |
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6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
