HCSGD entry for SCD5
1. General information
| Official gene symbol | SCD5 |
|---|---|
| Entrez ID | 79966 |
| Gene full name | stearoyl-CoA desaturase 5 |
| Other gene symbols | ACOD4 FADS4 HSCD5 SCD2 SCD4 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004768 | Stearoyl-CoA 9-desaturase activity | IEA | molecular_function |
| GO:0005506 | Iron ion binding | IEA | molecular_function |
| GO:0005789 | Endoplasmic reticulum membrane | IEA | cellular_component |
| GO:0006633 | Fatty acid biosynthetic process | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016717 | Oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6361079860 | 0.1470568367 | 0.9999902473 | 0.7410342649 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0694731091 |
| GSE13712_SHEAR | Down | -0.2020647090 |
| GSE13712_STATIC | Down | -0.2262613980 |
| GSE19018 | Up | 0.5188015566 |
| GSE19899_A1 | Down | -0.3022254108 |
| GSE19899_A2 | Down | -0.2335152907 |
| PubMed_21979375_A1 | Down | -0.6819504119 |
| PubMed_21979375_A2 | Down | -0.3614462261 |
| GSE35957 | Up | 0.6995514965 |
| GSE36640 | Up | 0.6078943346 |
| GSE54402 | Down | -0.4956269377 |
| GSE9593 | Down | -0.1426412407 |
| GSE43922 | Down | -0.3811647522 |
| GSE24585 | Down | -0.1590287185 |
| GSE37065 | Up | 0.2108462148 |
| GSE28863_A1 | Up | 0.0214740680 |
| GSE28863_A2 | Down | -0.0525508951 |
| GSE28863_A3 | Up | 0.0976771288 |
| GSE28863_A4 | Down | -0.0964335898 |
| GSE48662 | Up | 0.0818812166 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-140-3p | MIMAT0004597 | MIRT021675 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-324-5p | MIMAT0000761 | MIRT043059 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-30c-5p | MIMAT0000244 | MIRT047892 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049021 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
