HCSGD entry for HDAC11
1. General information
| Official gene symbol | HDAC11 |
|---|---|
| Entrez ID | 79885 |
| Gene full name | histone deacetylase 11 |
| Other gene symbols | HD11 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000118 | Histone deacetylase complex | IDA | cellular_component |
| GO:0004407 | Histone deacetylase activity | IDA | molecular_function |
| GO:0005634 | Nucleus | IDA IEA | cellular_component |
| GO:0005886 | Plasma membrane | IDA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0008134 | Transcription factor binding | TAS | molecular_function |
| GO:0014003 | Oligodendrocyte development | IEA | biological_process |
| GO:0016568 | Chromatin modification | TAS | biological_process |
| GO:0016575 | Histone deacetylation | IDA | biological_process |
| GO:0016787 | Hydrolase activity | IEA | molecular_function |
| GO:0032041 | NAD-dependent histone deacetylase activity (H3-K14 specific) | IEA | molecular_function |
| GO:0046969 | NAD-dependent histone deacetylase activity (H3-K9 specific) | IEA | molecular_function |
| GO:0046970 | NAD-dependent histone deacetylase activity (H4-K16 specific) | IEA | molecular_function |
| GO:0097372 | NAD-dependent histone deacetylase activity (H3-K18 specific) | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9657751529 | 0.0811022188 | 0.9999902473 | 0.5391996716 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0625558530 |
| GSE13712_SHEAR | Down | -0.2234094809 |
| GSE13712_STATIC | Down | -0.0110170292 |
| GSE19018 | Down | -0.0278786376 |
| GSE19899_A1 | Down | -0.2062545272 |
| GSE19899_A2 | Down | -0.2316722374 |
| PubMed_21979375_A1 | Down | -0.5856499596 |
| PubMed_21979375_A2 | Down | -0.5435477843 |
| GSE35957 | Up | 0.0007453888 |
| GSE36640 | Up | 0.4059450402 |
| GSE54402 | Down | -0.2013513646 |
| GSE9593 | Up | 0.2382836160 |
| GSE43922 | Down | -0.3005911351 |
| GSE24585 | Up | 0.0431581159 |
| GSE37065 | Down | -0.2071615781 |
| GSE28863_A1 | Down | -0.1483876960 |
| GSE28863_A2 | Down | -0.2941138444 |
| GSE28863_A3 | Down | -0.0656017994 |
| GSE28863_A4 | Down | -0.1430220084 |
| GSE48662 | Up | 0.3413486005 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
