HCSGD entry for TCTN2
1. General information
| Official gene symbol | TCTN2 |
|---|---|
| Entrez ID | 79867 |
| Gene full name | tectonic family member 2 |
| Other gene symbols | C12orf38 MKS8 TECT2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0005856 | Cytoskeleton | IEA | cellular_component |
| GO:0007224 | Smoothened signaling pathway | ISS | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0036038 | TCTN-B9D complex | ISS | cellular_component |
| GO:0042384 | Cilium assembly | ISS | biological_process |
| GO:0060271 | Cilium morphogenesis | ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3491362714 | 0.2567015425 | 0.9999902473 | 0.9716193989 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0017366401 |
| GSE13712_SHEAR | Down | -0.1822006569 |
| GSE13712_STATIC | Down | -0.2652367532 |
| GSE19018 | Up | 0.1939941179 |
| GSE19899_A1 | Down | -0.1404677711 |
| GSE19899_A2 | Down | -0.3292798229 |
| PubMed_21979375_A1 | Down | -0.1928458803 |
| PubMed_21979375_A2 | Down | -0.4545706647 |
| GSE35957 | Down | -0.0558187357 |
| GSE36640 | Down | -0.2662330862 |
| GSE54402 | Down | -0.2079537809 |
| GSE9593 | Down | -0.0478647229 |
| GSE43922 | Down | -0.3498929017 |
| GSE24585 | Up | 0.7398036502 |
| GSE37065 | Up | 0.0992729775 |
| GSE28863_A1 | Up | 0.7368852573 |
| GSE28863_A2 | Up | 0.6215592054 |
| GSE28863_A3 | Up | 0.2643320860 |
| GSE28863_A4 | Down | -0.1056770466 |
| GSE48662 | Up | 0.0248383838 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029239 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
