HCSGD entry for GEMIN6

1. General information

Official gene symbolGEMIN6
Entrez ID79833
Gene full namegem (nuclear organelle) associated protein 6
Other gene symbols
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000245Spliceosomal complex assemblyIEAbiological_process
GO:0000387Spliceosomal snRNP assemblyIDA TASbiological_process
GO:0000398MRNA splicing, via spliceosomeTASbiological_process
GO:0005515Protein bindingIPImolecular_function
GO:0005634NucleusIEAcellular_component
GO:0005654NucleoplasmIDA TAScellular_component
GO:0005681Spliceosomal complexIEAcellular_component
GO:0005737CytoplasmIDAcellular_component
GO:0005829CytosolIDA TAScellular_component
GO:0010467Gene expressionTASbiological_process
GO:0016070RNA metabolic processTASbiological_process
GO:0016604Nuclear bodyIDAcellular_component
GO:0032797SMN complexIDAcellular_component
GO:0034660NcRNA metabolic processTASbiological_process
GO:0034719SMN-Sm protein complexIDAcellular_component
GO:0097504Gemini of coiled bodiesIEAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.30831300480.10519614760.99999024730.6214048463

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.1791024028
GSE13712_SHEARDown-0.1492248408
GSE13712_STATICDown-0.0240816204
GSE19018Down-0.4210884776
GSE19899_A1Down-0.0115696599
GSE19899_A2Up0.2793114997
PubMed_21979375_A1Up0.6092242850
PubMed_21979375_A2Up0.1605323453
GSE35957Down-0.4090808972
GSE36640Down-0.6098993421
GSE54402Down-0.1196153318
GSE9593Down-0.3113489909
GSE43922Up0.3761346699
GSE24585Down-0.9347301212
GSE37065Down-0.0972897814
GSE28863_A1Up0.3451992493
GSE28863_A2Up0.1424691667
GSE28863_A3Down-0.3432337313
GSE28863_A4Up0.5110353378
GSE48662Down-0.2504336066

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-92a-3pMIMAT0000092MIRT049420CLASHFunctional MTI (Weak)23622248
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.