HCSGD entry for GEMIN7
1. General information
| Official gene symbol | GEMIN7 |
|---|---|
| Entrez ID | 79760 |
| Gene full name | gem (nuclear organelle) associated protein 7 |
| Other gene symbols | SIP3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000387 | Spliceosomal snRNP assembly | IDA TAS | biological_process |
| GO:0000398 | MRNA splicing, via spliceosome | TAS | biological_process |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005654 | Nucleoplasm | IDA TAS | cellular_component |
| GO:0005681 | Spliceosomal complex | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005829 | Cytosol | IDA TAS | cellular_component |
| GO:0010467 | Gene expression | TAS | biological_process |
| GO:0016070 | RNA metabolic process | TAS | biological_process |
| GO:0016604 | Nuclear body | IDA | cellular_component |
| GO:0032797 | SMN complex | IDA | cellular_component |
| GO:0034660 | NcRNA metabolic process | TAS | biological_process |
| GO:0034719 | SMN-Sm protein complex | IDA | cellular_component |
| GO:0097504 | Gemini of coiled bodies | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2299282398 | 0.4941241936 | 0.9129493438 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0007611366 |
| GSE13712_SHEAR | Up | 0.0414051033 |
| GSE13712_STATIC | Up | 0.3412711025 |
| GSE19018 | Down | -0.1564570565 |
| GSE19899_A1 | Up | 0.1856291915 |
| GSE19899_A2 | Up | 0.4349757671 |
| PubMed_21979375_A1 | Up | 1.2505679678 |
| PubMed_21979375_A2 | Up | 0.7176806170 |
| GSE35957 | Down | -0.1443712083 |
| GSE36640 | Down | -0.0219860937 |
| GSE54402 | Up | 0.4030526260 |
| GSE9593 | Down | -0.2276114933 |
| GSE43922 | Up | 0.1836509544 |
| GSE24585 | Down | -0.4771436531 |
| GSE37065 | Down | -0.0079302787 |
| GSE28863_A1 | Down | -0.2589962233 |
| GSE28863_A2 | Down | -0.1532059934 |
| GSE28863_A3 | Down | -0.1711928203 |
| GSE28863_A4 | Down | -0.1125171467 |
| GSE48662 | Down | -0.1324590767 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-let-7b-5p | MIMAT0000063 | MIRT001630 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
