HCSGD entry for SNIP1

1. General information

Official gene symbolSNIP1
Entrez ID79753
Gene full nameSmad nuclear interacting protein 1
Other gene symbolsPMRED
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005515Protein bindingIPImolecular_function
GO:0005634NucleusIDAcellular_component
GO:0005730NucleolusIDAcellular_component
GO:0005737CytoplasmIDAcellular_component
GO:0006355Regulation of transcription, DNA-templatedIEAbiological_process
GO:0007249I-kappaB kinase/NF-kappaB signalingIEAbiological_process
GO:0035196Production of miRNAs involved in gene silencing by miRNAIMPbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.01579707080.98633101330.31099080031.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.1376181994
GSE13712_SHEARUp0.1722928125
GSE13712_STATICUp0.2019311812
GSE19018Down-0.2516696264
GSE19899_A1Up0.1337835357
GSE19899_A2Up0.4588983679
PubMed_21979375_A1Up0.7337101868
PubMed_21979375_A2Up0.0871440561
GSE35957Up0.0233050394
GSE36640Up0.1905794922
GSE54402Up0.4732215419
GSE9593Up0.4025969784
GSE43922Up0.0597175170
GSE24585Up0.0214242857
GSE37065Up0.1423753890
GSE28863_A1Up0.8976517852
GSE28863_A2Up0.8275939861
GSE28863_A3Up0.7007995874
GSE28863_A4Down-0.0014662552
GSE48662Down-0.3502880500

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.