HCSGD entry for GALNT12
1. General information
| Official gene symbol | GALNT12 |
|---|---|
| Entrez ID | 79695 |
| Gene full name | UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12) |
| Other gene symbols | CRCS1 GalNAc-T12 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | TAS | cellular_component |
| GO:0004653 | Polypeptide N-acetylgalactosaminyltransferase activity | IEA | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016266 | O-glycan processing | TAS | biological_process |
| GO:0043687 | Post-translational protein modification | TAS | biological_process |
| GO:0044267 | Cellular protein metabolic process | TAS | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0339902435 | 0.0161476274 | 0.4247283962 | 0.2477452214 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3305625271 |
| GSE13712_SHEAR | Up | 3.2002110236 |
| GSE13712_STATIC | Up | 2.0818102938 |
| GSE19018 | Down | -0.7196026766 |
| GSE19899_A1 | Down | -0.4087704904 |
| GSE19899_A2 | Down | -1.4941921461 |
| PubMed_21979375_A1 | Down | -1.0151727776 |
| PubMed_21979375_A2 | Down | -0.9016783052 |
| GSE35957 | Down | -1.1316307627 |
| GSE36640 | Down | -1.0430154121 |
| GSE54402 | Down | -1.3438311687 |
| GSE9593 | Up | 0.1104113235 |
| GSE43922 | Down | -0.7459188015 |
| GSE24585 | Up | 0.7636286861 |
| GSE37065 | Up | 0.7407951900 |
| GSE28863_A1 | Up | 0.3069107886 |
| GSE28863_A2 | Up | 0.2764991605 |
| GSE28863_A3 | Up | 0.2457956583 |
| GSE28863_A4 | Up | 0.1954418297 |
| GSE48662 | Down | -0.3041971650 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT016888 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024339 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026189 | Microarray | Functional MTI (Weak) | 19074876 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
