HCSGD entry for VTCN1
1. General information
| Official gene symbol | VTCN1 |
|---|---|
| Entrez ID | 79679 |
| Gene full name | V-set domain containing T cell activation inhibitor 1 |
| Other gene symbols | B7-H4 B7H4 B7S1 B7X B7h.5 PRO1291 VCTN1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001562 | Response to protozoan | IEA | biological_process |
| GO:0002376 | Immune system process | IEA | biological_process |
| GO:0005102 | Receptor binding | IEA | molecular_function |
| GO:0009897 | External side of plasma membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0050868 | Negative regulation of T cell activation | IEA | biological_process |
| GO:0072602 | Interleukin-4 secretion | IEA | biological_process |
| GO:0072643 | Interferon-gamma secretion | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8834759508 | 0.5664605182 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0654493429 |
| GSE13712_SHEAR | Up | 0.0046844184 |
| GSE13712_STATIC | Down | -0.0663562408 |
| GSE19018 | Down | -0.1217943694 |
| GSE19899_A1 | Down | -0.0693901633 |
| GSE19899_A2 | Up | 0.4460056303 |
| PubMed_21979375_A1 | Down | -0.1060379558 |
| PubMed_21979375_A2 | Up | 0.0079542325 |
| GSE35957 | Up | 0.0523384342 |
| GSE36640 | Up | 0.0553192320 |
| GSE54402 | Up | 0.1186280095 |
| GSE9593 | Down | -0.1497962000 |
| GSE43922 | Up | 0.0151121102 |
| GSE24585 | Down | -0.0423006997 |
| GSE37065 | Down | -0.0262533707 |
| GSE28863_A1 | Down | -0.0905060671 |
| GSE28863_A2 | Down | -0.1082728288 |
| GSE28863_A3 | Up | 0.0475274785 |
| GSE28863_A4 | Up | 0.0405450379 |
| GSE48662 | Down | -0.0899973183 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018842 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
