HCSGD entry for TMEM53
1. General information
| Official gene symbol | TMEM53 |
|---|---|
| Entrez ID | 79639 |
| Gene full name | transmembrane protein 53 |
| Other gene symbols | NET4 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2598843547 | 0.8840034763 | 0.9531317409 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1283229628 |
| GSE13712_SHEAR | Up | 0.2680184885 |
| GSE13712_STATIC | Down | -0.0089202771 |
| GSE19018 | Down | -0.0665705409 |
| GSE19899_A1 | Down | -0.0767466143 |
| GSE19899_A2 | Up | 0.5979627543 |
| PubMed_21979375_A1 | Up | 0.4458893083 |
| PubMed_21979375_A2 | Up | 0.4445208483 |
| GSE35957 | Down | -0.0413401915 |
| GSE36640 | Up | 0.0547697415 |
| GSE54402 | Up | 0.2469770404 |
| GSE9593 | Up | 0.0263214140 |
| GSE43922 | Up | 0.0842596668 |
| GSE24585 | Down | -0.0252767678 |
| GSE37065 | Up | 0.4068785860 |
| GSE28863_A1 | Down | -0.1959019398 |
| GSE28863_A2 | Down | -0.0202486800 |
| GSE28863_A3 | Down | -0.2666936244 |
| GSE28863_A4 | Down | -0.1186121821 |
| GSE48662 | Up | 0.0957968314 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018747 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
