HCSGD entry for EFTUD1
1. General information
| Official gene symbol | EFTUD1 |
|---|---|
| Entrez ID | 79631 |
| Gene full name | elongation factor Tu GTP binding domain containing 1 |
| Other gene symbols | FAM42A HsT19294 RIA1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003746 | Translation elongation factor activity | IEA | molecular_function |
| GO:0003924 | GTPase activity | IDA IEA | molecular_function |
| GO:0005525 | GTP binding | IEA | molecular_function |
| GO:0006184 | GTP catabolic process | IDA | biological_process |
| GO:0042256 | Mature ribosome assembly | IMP | biological_process |
| GO:0043022 | Ribosome binding | IMP | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0049275369 | 0.9916391209 | 0.1837077904 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2885016387 |
| GSE13712_SHEAR | Up | 0.2492091919 |
| GSE13712_STATIC | Down | -0.3180517046 |
| GSE19018 | Up | 0.1204345602 |
| GSE19899_A1 | Up | 0.7804527109 |
| GSE19899_A2 | Up | 0.6671189908 |
| PubMed_21979375_A1 | Up | 0.9146199278 |
| PubMed_21979375_A2 | Up | 1.5212666498 |
| GSE35957 | Down | -0.5946929781 |
| GSE36640 | Down | -0.0320706541 |
| GSE54402 | Up | 1.1273779309 |
| GSE9593 | Up | 0.3305490064 |
| GSE43922 | Up | 0.8226560846 |
| GSE24585 | Up | 0.3084329233 |
| GSE37065 | Up | 0.4162307313 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Up | 0.2053580729 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Name | Drug | Accession number |
|---|---|---|
| S-(Methylmercury)-L-Cysteine | DB02750 | EXPT00956 |
| Deoxycholic Acid | DB03619 | EXPT01194 | DB07690 |
| Guanosine-5'-Diphosphate | DB04315 | EXPT01573 |
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-30a-5p | MIMAT0000087 | MIRT028416 | Proteomics | Functional MTI (Weak) | 18668040 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
