HCSGD entry for NDNF

1. General information

Official gene symbolNDNF
Entrez ID79625
Gene full nameneuron-derived neurotrophic factor
Other gene symbolsC4orf31
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0001764Neuron migrationIDAbiological_process
GO:0005539Glycosaminoglycan bindingISSmolecular_function
GO:0005576Extracellular regionIDAcellular_component
GO:0008201Heparin bindingIEA ISSmolecular_function
GO:0010811Positive regulation of cell-substrate adhesionIEA ISSbiological_process
GO:0010976Positive regulation of neuron projection developmentIDAbiological_process
GO:0016049Cell growthIDAbiological_process
GO:0019800Peptide cross-linking via chondroitin 4-sulfate glycosaminoglycanIEA ISSbiological_process
GO:0030198Extracellular matrix organizationIEA ISSbiological_process
GO:0031012Extracellular matrixIEA ISScellular_component
GO:0043524Negative regulation of neuron apoptotic processIDAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.01313483910.07130208960.28501409730.5040288859

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.9342020178
GSE13712_SHEARUp0.0890676553
GSE13712_STATICUp0.1946285546
GSE19018Down-0.0014537141
GSE19899_A1Up0.3975465900
GSE19899_A2Up0.4699247917
PubMed_21979375_A1Up0.4491755241
PubMed_21979375_A2Up0.2393380515
GSE35957Down-0.7115162998
GSE36640Up2.5878012549
GSE54402Up1.9556559843
GSE9593Down-0.9866592380
GSE43922Up0.3891975387
GSE24585Up0.1694724761
GSE37065Down-0.7351214375
GSE28863_A1Up0.1494865108
GSE28863_A2Up0.6609670510
GSE28863_A3Down-0.3742647509
GSE28863_A4Down-0.8175685694
GSE48662Down-0.0398070326

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.