HCSGD entry for TCTN1

1. General information

Official gene symbolTCTN1
Entrez ID79600
Gene full nametectonic family member 1
Other gene symbolsJBTS13 TECT1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0001701In utero embryonic developmentIEAbiological_process
GO:0001841Neural tube formationIEAbiological_process
GO:0005615Extracellular spaceIEAcellular_component
GO:0005737CytoplasmIEAcellular_component
GO:0005856CytoskeletonIEAcellular_component
GO:0008589Regulation of smoothened signaling pathwayIEAbiological_process
GO:0016020MembraneIEAcellular_component
GO:0021523Somatic motor neuron differentiationIEAbiological_process
GO:0021537Telencephalon developmentIEAbiological_process
GO:0021904Dorsal/ventral neural tube patterningIEAbiological_process
GO:0021956Central nervous system interneuron axonogenesisIEAbiological_process
GO:0036038TCTN-B9D complexISScellular_component
GO:0060271Cilium morphogenesisISSbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.71778951790.11100120060.99999024730.6381962866

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.1351228026
GSE13712_SHEARDown-0.5202516323
GSE13712_STATICDown-0.4787520150
GSE19018Up0.1580809665
GSE19899_A1Down-0.2018331381
GSE19899_A2Down-0.2411968340
PubMed_21979375_A1Down-0.2976734339
PubMed_21979375_A2Down-0.3322950274
GSE35957Up0.0337910682
GSE36640Up0.3677592952
GSE54402Down-0.2012921255
GSE9593Up0.3571060910
GSE43922Down-0.5189979964
GSE24585Up0.6119347889
GSE37065Down-0.1624197099
GSE28863_A1Up0.3574376560
GSE28863_A2Up0.0355825743
GSE28863_A3Down-0.2727381838
GSE28863_A4Down-0.0963050183
GSE48662Up0.3823996959

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-324-3pMIMAT0000762MIRT042925CLASHFunctional MTI (Weak)23622248
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.