HCSGD entry for RNF219
1. General information
| Official gene symbol | RNF219 |
|---|---|
| Entrez ID | 79596 |
| Gene full name | ring finger protein 219 |
| Other gene symbols | C13orf7 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9795366589 | 0.0310617378 | 0.9999902473 | 0.3313753331 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1467463378 |
| GSE13712_SHEAR | Down | -0.2497704319 |
| GSE13712_STATIC | Down | -0.1789656876 |
| GSE19018 | Down | -0.3328858182 |
| GSE19899_A1 | Down | -0.0840744529 |
| GSE19899_A2 | Down | -0.6371757583 |
| PubMed_21979375_A1 | Up | 0.0849564925 |
| PubMed_21979375_A2 | Down | -0.5544383879 |
| GSE35957 | Up | 0.0823891875 |
| GSE36640 | Down | -0.9993304093 |
| GSE54402 | Down | -0.0559259324 |
| GSE9593 | Down | -0.2500366866 |
| GSE43922 | Down | -0.4192362200 |
| GSE24585 | Down | -0.1247218130 |
| GSE37065 | Up | 0.0482020948 |
| GSE28863_A1 | Up | 0.0536128889 |
| GSE28863_A2 | Up | 0.1823688176 |
| GSE28863_A3 | Down | -0.7020015264 |
| GSE28863_A4 | Up | 0.2198297017 |
| GSE48662 | Down | -0.2146483493 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-148b-3p | MIMAT0000759 | MIRT019400 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-218-5p | MIMAT0000275 | MIRT024235 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024258 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026428 | Microarray | Functional MTI (Weak) | 19074876 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
