HCSGD entry for PAGR1
1. General information
| Official gene symbol | PAGR1 |
|---|---|
| Entrez ID | 79447 |
| Gene full name | PAXIP1 associated glutamate-rich protein 1 |
| Other gene symbols | C16orf53 GAS PA1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0035097 | Histone methyltransferase complex | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9637259451 | 0.0180373542 | 0.9999902473 | 0.2628799557 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0266834555 |
| GSE13712_SHEAR | Down | -0.8063419264 |
| GSE13712_STATIC | Down | -0.2773756713 |
| GSE19018 | Down | -0.3175275385 |
| GSE19899_A1 | Down | -0.2606942587 |
| GSE19899_A2 | Down | -0.8082773812 |
| PubMed_21979375_A1 | Down | -0.6291487282 |
| PubMed_21979375_A2 | Down | -1.1049937435 |
| GSE35957 | Down | -0.7561301062 |
| GSE36640 | Down | -1.2151660892 |
| GSE54402 | Down | -0.0836954522 |
| GSE9593 | Down | -0.5655830038 |
| GSE43922 | Up | 0.0827753055 |
| GSE24585 | Up | 0.0584048052 |
| GSE37065 | Down | -0.1059738136 |
| GSE28863_A1 | Up | 0.3406325608 |
| GSE28863_A2 | Up | 0.2636945836 |
| GSE28863_A3 | Down | -0.3764720130 |
| GSE28863_A4 | Up | 0.3372464171 |
| GSE48662 | Down | -0.1746821443 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-128-3p | MIMAT0000424 | MIRT022081 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-103a-3p | MIMAT0000101 | MIRT027142 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT032056 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-744-5p | MIMAT0004945 | MIRT037570 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-130b-5p | MIMAT0004680 | MIRT038302 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
