HCSGD entry for LRFN3
1. General information
| Official gene symbol | LRFN3 |
|---|---|
| Entrez ID | 79414 |
| Gene full name | leucine rich repeat and fibronectin type III domain containing 3 |
| Other gene symbols | FIGLER1 SALM4 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0007155 | Cell adhesion | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0030054 | Cell junction | IEA | cellular_component |
| GO:0030424 | Axon | IEA | cellular_component |
| GO:0030425 | Dendrite | IEA | cellular_component |
| GO:0042734 | Presynaptic membrane | IEA | cellular_component |
| GO:0045211 | Postsynaptic membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3677961438 | 0.5431030356 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0663413230 |
| GSE13712_SHEAR | Down | -0.4803644602 |
| GSE13712_STATIC | Down | -0.3242949725 |
| GSE19018 | Up | 0.1470857542 |
| GSE19899_A1 | Down | -0.4439427457 |
| GSE19899_A2 | Up | 0.6584962149 |
| PubMed_21979375_A1 | Up | 0.1112157605 |
| PubMed_21979375_A2 | Up | 0.4869457294 |
| GSE35957 | Up | 0.2675576018 |
| GSE36640 | Up | 0.0747999420 |
| GSE54402 | Up | 0.2726854130 |
| GSE9593 | Up | 0.0406158874 |
| GSE43922 | Up | 0.1429486035 |
| GSE24585 | Down | -0.1474913050 |
| GSE37065 | Down | -0.1332229609 |
| GSE28863_A1 | Up | 0.0752999011 |
| GSE28863_A2 | Down | -0.0930949926 |
| GSE28863_A3 | Up | 0.1471260011 |
| GSE28863_A4 | Down | -0.1260813160 |
| GSE48662 | Up | 0.2498425185 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029632 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
