HCSGD entry for LST1
1. General information
| Official gene symbol | LST1 |
|---|---|
| Entrez ID | 7940 |
| Gene full name | leukocyte specific transcript 1 |
| Other gene symbols | B144 D6S49E LST-1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | IEA | cellular_component |
| GO:0000902 | Cell morphogenesis | IEA | biological_process |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005794 | Golgi apparatus | NAS | cellular_component |
| GO:0006955 | Immune response | IEA NAS | biological_process |
| GO:0008360 | Regulation of cell shape | IEA | biological_process |
| GO:0009653 | Anatomical structure morphogenesis | NAS | biological_process |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IDA | cellular_component |
| GO:0016358 | Dendrite development | IDA | biological_process |
| GO:0050672 | Negative regulation of lymphocyte proliferation | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8348242126 | 0.7722104555 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0175612249 |
| GSE13712_SHEAR | Down | -0.0057185472 |
| GSE13712_STATIC | Up | 0.1342923534 |
| GSE19018 | Up | 0.0585690414 |
| GSE19899_A1 | Up | 0.1100992111 |
| GSE19899_A2 | Up | 0.0681109090 |
| PubMed_21979375_A1 | Down | -0.0909303102 |
| PubMed_21979375_A2 | Down | -0.0706916054 |
| GSE35957 | Down | -0.0871659231 |
| GSE36640 | Up | 0.0852352720 |
| GSE54402 | Down | -0.0136982153 |
| GSE9593 | Down | -0.0622834632 |
| GSE43922 | Up | 0.0391664209 |
| GSE24585 | Up | 0.1359198417 |
| GSE37065 | Down | -0.0474903398 |
| GSE28863_A1 | Down | -0.2450707551 |
| GSE28863_A2 | Down | -0.0663062849 |
| GSE28863_A3 | Up | 0.2059249594 |
| GSE28863_A4 | Down | -0.0582940875 |
| GSE48662 | Up | 0.0115290055 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
