HCSGD entry for ZNF557
1. General information
| Official gene symbol | ZNF557 |
|---|---|
| Entrez ID | 79230 |
| Gene full name | zinc finger protein 557 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0456643821 | 0.9259400327 | 0.4742737298 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2404317940 |
| GSE13712_SHEAR | Up | 0.4826245004 |
| GSE13712_STATIC | Up | 0.1284751312 |
| GSE19018 | Down | -0.1644853437 |
| GSE19899_A1 | Up | 0.1154559859 |
| GSE19899_A2 | Up | 1.1814269733 |
| PubMed_21979375_A1 | Up | 0.3918701865 |
| PubMed_21979375_A2 | Up | 1.1355677512 |
| GSE35957 | Down | -0.2511042266 |
| GSE36640 | Down | -0.1024887982 |
| GSE54402 | Up | 0.1900410709 |
| GSE9593 | Up | 0.0550251038 |
| GSE43922 | Up | 0.1307866427 |
| GSE24585 | Down | -0.0185441358 |
| GSE37065 | Up | 0.0294622229 |
| GSE28863_A1 | Up | 0.5126585325 |
| GSE28863_A2 | Up | 0.1074949611 |
| GSE28863_A3 | Down | -0.2137866495 |
| GSE28863_A4 | Down | -0.1094757683 |
| GSE48662 | Up | 0.0475799084 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-25-3p | MIMAT0000081 | MIRT050221 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
