HCSGD entry for SLC39A7
1. General information
| Official gene symbol | SLC39A7 |
|---|---|
| Entrez ID | 7922 |
| Gene full name | solute carrier family 39 (zinc transporter), member 7 |
| Other gene symbols | D6S115E D6S2244E H2-KE4 HKE4 KE4 RING5 ZIP7 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005789 | Endoplasmic reticulum membrane | TAS | cellular_component |
| GO:0005794 | Golgi apparatus | IEA | cellular_component |
| GO:0006829 | Zinc ion transport | IEA | biological_process |
| GO:0016020 | Membrane | IEA TAS | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0046873 | Metal ion transmembrane transporter activity | IEA | molecular_function |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2152294518 | 0.3575373580 | 0.8935261856 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3339046199 |
| GSE13712_SHEAR | Down | -0.3071220526 |
| GSE13712_STATIC | Up | 0.2253809116 |
| GSE19018 | Up | 0.1556787212 |
| GSE19899_A1 | Down | -0.0158881776 |
| GSE19899_A2 | Down | -0.2994691135 |
| PubMed_21979375_A1 | Down | -0.3729443411 |
| PubMed_21979375_A2 | Up | 0.0389347045 |
| GSE35957 | Up | 0.3321409107 |
| GSE36640 | Up | 0.6120892071 |
| GSE54402 | Down | -0.1282652517 |
| GSE9593 | Up | 0.4952460135 |
| GSE43922 | Down | -0.0419482704 |
| GSE24585 | Down | -0.4429635449 |
| GSE37065 | Down | -0.1958857046 |
| GSE28863_A1 | Up | 0.0382387055 |
| GSE28863_A2 | Up | 0.2579296170 |
| GSE28863_A3 | Down | -0.4987594640 |
| GSE28863_A4 | Down | -0.0363753830 |
| GSE48662 | Up | 0.8400514261 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-340-5p | MIMAT0004692 | MIRT019558 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-128-3p | MIMAT0000424 | MIRT022098 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-1229-3p | MIMAT0005584 | MIRT036341 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
