HCSGD entry for GNPTAB
1. General information
| Official gene symbol | GNPTAB |
|---|---|
| Entrez ID | 79158 |
| Gene full name | N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits |
| Other gene symbols | GNPTA ICD |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | IEA | cellular_component |
| GO:0003976 | UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity | IEA | molecular_function |
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0008134 | Transcription factor binding | IEA | molecular_function |
| GO:0009306 | Protein secretion | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0030154 | Cell differentiation | IEA | biological_process |
| GO:0046835 | Carbohydrate phosphorylation | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0838165609 | 0.7797479313 | 0.6094297514 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0701600959 |
| GSE13712_SHEAR | Down | -0.0126755441 |
| GSE13712_STATIC | Down | -0.0019889631 |
| GSE19018 | Up | 0.0002660336 |
| GSE19899_A1 | Up | 0.0689256979 |
| GSE19899_A2 | Up | 0.0394896168 |
| PubMed_21979375_A1 | Down | -0.0872254137 |
| PubMed_21979375_A2 | Up | 0.2238079517 |
| GSE35957 | Up | 0.4134589044 |
| GSE36640 | Up | 0.9645290663 |
| GSE54402 | Down | -0.7463781380 |
| GSE9593 | Up | 0.1310599549 |
| GSE43922 | Up | 0.2638054831 |
| GSE24585 | Down | -0.0140771532 |
| GSE37065 | Up | 0.2839175373 |
| GSE28863_A1 | Up | 0.2886731878 |
| GSE28863_A2 | Up | 0.8867614415 |
| GSE28863_A3 | Down | -0.8240375839 |
| GSE28863_A4 | Up | 0.1537181363 |
| GSE48662 | Up | 0.2000025248 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-98-5p | MIMAT0000096 | MIRT027553 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT040448 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
