HCSGD entry for PHF23
1. General information
| Official gene symbol | PHF23 |
|---|---|
| Entrez ID | 79142 |
| Gene full name | PHD finger protein 23 |
| Other gene symbols | hJUNE-1b |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0418313286 | 0.6573750769 | 0.4574625311 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 1.0034055194 |
| GSE13712_SHEAR | Up | 0.2979444453 |
| GSE13712_STATIC | Up | 0.2166320450 |
| GSE19018 | Down | -0.6202620624 |
| GSE19899_A1 | Up | 0.2558108101 |
| GSE19899_A2 | Up | 0.6334806866 |
| PubMed_21979375_A1 | Up | 0.7292334706 |
| PubMed_21979375_A2 | Down | -0.7398311865 |
| GSE35957 | Down | -0.0086419441 |
| GSE36640 | Up | 0.6595003781 |
| GSE54402 | Up | 0.6239150121 |
| GSE9593 | Up | 0.1593617139 |
| GSE43922 | Up | 0.3933289663 |
| GSE24585 | Down | -0.0390112403 |
| GSE37065 | Down | -0.0793978421 |
| GSE28863_A1 | Down | -0.1371331854 |
| GSE28863_A2 | Down | -0.3694230206 |
| GSE28863_A3 | Down | -0.2535680385 |
| GSE28863_A4 | Up | 0.1044863725 |
| GSE48662 | Up | 0.0841282951 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-let-7e-3p | MIMAT0004485 | MIRT038992 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92b-3p | MIMAT0003218 | MIRT040585 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT042115 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-331-3p | MIMAT0000760 | MIRT043569 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
