HCSGD entry for CCDC28B

1. General information

Official gene symbolCCDC28B
Entrez ID79140
Gene full namecoiled-coil domain containing 28B
Other gene symbolsRP4-622L5.5
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005515Protein bindingIPImolecular_function
GO:0005737CytoplasmIEAcellular_component
GO:0005813CentrosomeIDAcellular_component
GO:0042384Cilium assemblyIMPbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.98990895100.01854844040.99999024730.2666376297

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.2620619297
GSE13712_SHEARDown-0.6266438993
GSE13712_STATICDown-0.3691413891
GSE19018Up0.2091725874
GSE19899_A1Down-0.0680311940
GSE19899_A2Down-0.9716302430
PubMed_21979375_A1Down-0.9295236156
PubMed_21979375_A2Down-0.7386516554
GSE35957Down-0.2152365752
GSE36640Up0.2609090526
GSE54402Down-0.4546284522
GSE9593Down-0.3268455421
GSE43922Down-0.0032364818
GSE24585Down-0.2023315938
GSE37065Down-0.1581299004
GSE28863_A1Up0.0369541995
GSE28863_A2Down-0.1248499476
GSE28863_A3Up0.0991162642
GSE28863_A4Down-0.0847369033
GSE48662Down-0.3165856539

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.