HCSGD entry for APOO
1. General information
| Official gene symbol | APOO |
|---|---|
| Entrez ID | 79135 |
| Gene full name | apolipoprotein O |
| Other gene symbols | FAM121B |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005615 | Extracellular space | ISS | cellular_component |
| GO:0006869 | Lipid transport | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0034361 | Very-low-density lipoprotein particle | IEA | cellular_component |
| GO:0034362 | Low-density lipoprotein particle | IEA | cellular_component |
| GO:0034364 | High-density lipoprotein particle | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8773186961 | 0.0288307055 | 0.9999902473 | 0.3225044624 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1513869362 |
| GSE13712_SHEAR | Down | -0.3617843328 |
| GSE13712_STATIC | Up | 0.0559454563 |
| GSE19018 | Up | 0.2371008341 |
| GSE19899_A1 | Down | -0.4437042127 |
| GSE19899_A2 | Down | -0.5582266132 |
| PubMed_21979375_A1 | Down | -0.2577051983 |
| PubMed_21979375_A2 | Down | -1.0008321569 |
| GSE35957 | Down | -1.0753500803 |
| GSE36640 | Down | -0.5978557328 |
| GSE54402 | Up | 0.4890773569 |
| GSE9593 | Down | -0.6814966259 |
| GSE43922 | Down | -0.3177936729 |
| GSE24585 | Down | -0.0483223177 |
| GSE37065 | Down | -0.0067243461 |
| GSE28863_A1 | Down | -0.1964197050 |
| GSE28863_A2 | Down | -0.1815146657 |
| GSE28863_A3 | Down | -0.0764852901 |
| GSE28863_A4 | Up | 0.2849369024 |
| GSE48662 | Down | -0.3191433508 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029755 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
