HCSGD entry for CHAC1
1. General information
| Official gene symbol | CHAC1 |
|---|---|
| Entrez ID | 79094 |
| Gene full name | ChaC, cation transport regulator homolog 1 (E. coli) |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005112 | Notch binding | IEA ISS | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005794 | Golgi apparatus | IEA | cellular_component |
| GO:0005802 | Trans-Golgi network | IEA ISS | cellular_component |
| GO:0005829 | Cytosol | IDA | cellular_component |
| GO:0006986 | Response to unfolded protein | IEA | biological_process |
| GO:0007219 | Notch signaling pathway | IEA | biological_process |
| GO:0010955 | Negative regulation of protein processing | IMP | biological_process |
| GO:0022008 | Neurogenesis | IEA ISS | biological_process |
| GO:0045746 | Negative regulation of Notch signaling pathway | IMP | biological_process |
| GO:0070059 | Intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4480576878 | 0.0021655218 | 0.9999902473 | 0.0897617323 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2569464057 |
| GSE13712_SHEAR | Up | 1.7924185686 |
| GSE13712_STATIC | Up | 0.2058683051 |
| GSE19018 | Up | 0.0224836156 |
| GSE19899_A1 | Down | -2.1390255473 |
| GSE19899_A2 | Down | -1.4834031128 |
| PubMed_21979375_A1 | Down | -0.9350814744 |
| PubMed_21979375_A2 | Down | -1.3776823793 |
| GSE35957 | Down | -0.4533955859 |
| GSE36640 | Up | 0.2025770432 |
| GSE54402 | Down | -0.2206598369 |
| GSE9593 | Up | 0.7809337124 |
| GSE43922 | Down | -0.8106438238 |
| GSE24585 | Up | 0.3225980122 |
| GSE37065 | Down | -0.9472454219 |
| GSE28863_A1 | Down | -0.4934701521 |
| GSE28863_A2 | Down | -1.0247498248 |
| GSE28863_A3 | Up | 0.1230367621 |
| GSE28863_A4 | Down | -0.2649215830 |
| GSE48662 | Up | 0.8045794036 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017672 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
