HCSGD entry for NABP2
1. General information
| Official gene symbol | NABP2 |
|---|---|
| Entrez ID | 79035 |
| Gene full name | nucleic acid binding protein 2 |
| Other gene symbols | OBFC2B SOSS-B1 SSB1 hSSB1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000724 | Double-strand break repair via homologous recombination | IMP | biological_process |
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003697 | Single-stranded DNA binding | IDA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0006281 | DNA repair | IMP | biological_process |
| GO:0006974 | Cellular response to DNA damage stimulus | IMP | biological_process |
| GO:0007093 | Mitotic cell cycle checkpoint | IMP | biological_process |
| GO:0010212 | Response to ionizing radiation | IMP | biological_process |
| GO:0070876 | SOSS complex | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4031591429 | 0.1524764903 | 0.9999902473 | 0.7543860338 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3909010078 |
| GSE13712_SHEAR | Down | -0.4013349321 |
| GSE13712_STATIC | Down | -0.3801567534 |
| GSE19018 | Down | -0.2148139883 |
| GSE19899_A1 | Down | -0.0715090314 |
| GSE19899_A2 | Down | -0.1508569944 |
| PubMed_21979375_A1 | Down | -0.1935271601 |
| PubMed_21979375_A2 | Up | 0.2139704041 |
| GSE35957 | Down | -0.1996527235 |
| GSE36640 | Down | -0.6118798897 |
| GSE54402 | Up | 0.2215616282 |
| GSE9593 | Down | -0.0998758852 |
| GSE43922 | Up | 0.0141891763 |
| GSE24585 | Down | -0.5229554039 |
| GSE37065 | Up | 0.0022011876 |
| GSE28863_A1 | Up | 0.2697899407 |
| GSE28863_A2 | Down | -0.0206460346 |
| GSE28863_A3 | Down | -0.1008811634 |
| GSE28863_A4 | Up | 0.1928978220 |
| GSE48662 | Up | 0.0023575813 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-769-5p | MIMAT0003886 | MIRT039164 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92b-3p | MIMAT0003218 | MIRT040604 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-505-3p | MIMAT0002876 | MIRT041020 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT042316 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-342-3p | MIMAT0000753 | MIRT043716 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-221-3p | MIMAT0000278 | MIRT046935 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT052069 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
