HCSGD entry for LRFN4
1. General information
| Official gene symbol | LRFN4 |
|---|---|
| Entrez ID | 78999 |
| Gene full name | leucine rich repeat and fibronectin type III domain containing 4 |
| Other gene symbols | FIGLER6 SALM3 SALM3. |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4848759698 | 0.6328470309 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0861150696 |
| GSE13712_SHEAR | Down | -0.0945006059 |
| GSE13712_STATIC | Up | 0.3309013522 |
| GSE19018 | Up | 0.0743975811 |
| GSE19899_A1 | Down | -0.0911560025 |
| GSE19899_A2 | Up | 0.2322609241 |
| PubMed_21979375_A1 | Down | -0.1519220208 |
| PubMed_21979375_A2 | Up | 0.2503474557 |
| GSE35957 | Down | -0.1764437819 |
| GSE36640 | Down | -0.1960368860 |
| GSE54402 | Down | -0.1846191858 |
| GSE9593 | Down | -0.2490367886 |
| GSE43922 | Up | 0.2304052201 |
| GSE24585 | Up | 0.1491358504 |
| GSE37065 | Down | -0.1897156038 |
| GSE28863_A1 | Up | 0.0026272267 |
| GSE28863_A2 | Down | -0.1387596302 |
| GSE28863_A3 | Up | 0.1328027253 |
| GSE28863_A4 | Up | 0.1227331650 |
| GSE48662 | Up | 0.1885108484 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-98-5p | MIMAT0000096 | MIRT027568 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
