HCSGD entry for YIPF2
1. General information
| Official gene symbol | YIPF2 |
|---|---|
| Entrez ID | 78992 |
| Gene full name | Yip1 domain family, member 2 |
| Other gene symbols | FinGER2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0030133 | Transport vesicle | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9649482277 | 0.0583348087 | 0.9999902473 | 0.4540761679 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1407433015 |
| GSE13712_SHEAR | Down | -0.1275259002 |
| GSE13712_STATIC | Down | -0.2106659129 |
| GSE19018 | Up | 0.1294280685 |
| GSE19899_A1 | Down | -0.2065134900 |
| GSE19899_A2 | Down | -0.1028525457 |
| PubMed_21979375_A1 | Down | -0.3647149993 |
| PubMed_21979375_A2 | Down | -0.4487521656 |
| GSE35957 | Down | -0.0589334983 |
| GSE36640 | Down | -0.0385320059 |
| GSE54402 | Down | -0.1895585074 |
| GSE9593 | Up | 0.1583858727 |
| GSE43922 | Down | -0.1052863923 |
| GSE24585 | Down | -0.1270377833 |
| GSE37065 | Down | -0.2704805332 |
| GSE28863_A1 | Down | -0.2486224088 |
| GSE28863_A2 | Down | -0.2869805919 |
| GSE28863_A3 | Down | -0.6350578081 |
| GSE28863_A4 | Down | -0.0402833303 |
| GSE48662 | Up | 0.3248171772 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-340-5p | MIMAT0004692 | MIRT019579 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-34a-5p | MIMAT0000255 | MIRT025577 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT051142 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
