HCSGD entry for SLC30A4
1. General information
| Official gene symbol | SLC30A4 |
|---|---|
| Entrez ID | 7782 |
| Gene full name | solute carrier family 30 (zinc transporter), member 4 |
| Other gene symbols | ZNT4 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005385 | Zinc ion transmembrane transporter activity | TAS | molecular_function |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005770 | Late endosome | IDA | cellular_component |
| GO:0009636 | Response to toxic substance | IDA | biological_process |
| GO:0010008 | Endosome membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0034220 | Ion transmembrane transport | TAS | biological_process |
| GO:0055069 | Zinc ion homeostasis | IEA | biological_process |
| GO:0061088 | Regulation of sequestering of zinc ion | IDA | biological_process |
| GO:0071577 | Zinc ion transmembrane transport | TAS | biological_process |
| GO:0072511 | Divalent inorganic cation transport | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0642605182 | 0.5580503932 | 0.5464947011 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1690193927 |
| GSE13712_SHEAR | Up | 0.0381757662 |
| GSE13712_STATIC | Up | 0.2095947989 |
| GSE19018 | Up | 0.1893873131 |
| GSE19899_A1 | Down | -0.0053695453 |
| GSE19899_A2 | Down | -0.1436215502 |
| PubMed_21979375_A1 | Down | -0.1775084382 |
| PubMed_21979375_A2 | Up | 0.1449166858 |
| GSE35957 | Up | 0.3380527311 |
| GSE36640 | Up | 1.3464219503 |
| GSE54402 | Down | -0.6819369755 |
| GSE9593 | Up | 0.4007701323 |
| GSE43922 | Up | 0.0103743449 |
| GSE24585 | Up | 0.3165941104 |
| GSE37065 | Down | -0.0780534772 |
| GSE28863_A1 | Down | -0.4832336780 |
| GSE28863_A2 | Up | 0.4194833789 |
| GSE28863_A3 | Down | -0.8612365473 |
| GSE28863_A4 | Up | 0.1889776129 |
| GSE48662 | Up | 1.2031951667 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-9-5p | MIMAT0000441 | MIRT021423 | Microarray | Functional MTI (Weak) | 17612493 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
