HCSGD entry for TMEM50B
1. General information
| Official gene symbol | TMEM50B |
|---|---|
| Entrez ID | 757 |
| Gene full name | transmembrane protein 50B |
| Other gene symbols | C21orf4 HCVP7TP3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005783 | Endoplasmic reticulum | IDA | cellular_component |
| GO:0005886 | Plasma membrane | IDA | cellular_component |
| GO:0008150 | Biological_process | ND | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3065915657 | 0.1279426466 | 0.9999902473 | 0.6892692182 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3953859756 |
| GSE13712_SHEAR | Down | -0.4131909778 |
| GSE13712_STATIC | Down | -0.1573002941 |
| GSE19018 | Up | 0.2161357855 |
| GSE19899_A1 | Down | -0.7204793438 |
| GSE19899_A2 | Down | -0.3291527523 |
| PubMed_21979375_A1 | Down | -0.7375586093 |
| PubMed_21979375_A2 | Down | -0.4740937688 |
| GSE35957 | Up | 0.2964866878 |
| GSE36640 | Up | 0.6955632665 |
| GSE54402 | Down | -0.0411236304 |
| GSE9593 | Up | 0.1017824981 |
| GSE43922 | Down | -0.3163396527 |
| GSE24585 | Up | 0.6114387297 |
| GSE37065 | Up | 0.1252583185 |
| GSE28863_A1 | Down | -0.0314657290 |
| GSE28863_A2 | Up | 0.2773546896 |
| GSE28863_A3 | Down | -0.9524771255 |
| GSE28863_A4 | Up | 0.1627538387 |
| GSE48662 | Up | 0.1786163311 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029204 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
