HCSGD entry for VSNL1
1. General information
| Official gene symbol | VSNL1 |
|---|---|
| Entrez ID | 7447 |
| Gene full name | visinin-like 1 |
| Other gene symbols | HLP3 HPCAL3 HUVISL1 VILIP VILIP-1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0298394780 | 0.9565989970 | 0.3999006619 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1639680249 |
| GSE13712_SHEAR | Down | -0.0210719076 |
| GSE13712_STATIC | Down | -0.0939194590 |
| GSE19018 | Up | 0.0696582737 |
| GSE19899_A1 | Up | 0.1090065831 |
| GSE19899_A2 | Up | 0.3775173714 |
| PubMed_21979375_A1 | Up | 0.2370118007 |
| PubMed_21979375_A2 | Up | 0.1010038368 |
| GSE35957 | Up | 0.5307988355 |
| GSE36640 | Down | -0.3866363538 |
| GSE54402 | Up | 1.4844758439 |
| GSE9593 | Down | -0.0058337259 |
| GSE43922 | Up | 0.4283185430 |
| GSE24585 | Up | 0.4637891210 |
| GSE37065 | Up | 0.6632099012 |
| GSE28863_A1 | Down | -0.0361362978 |
| GSE28863_A2 | Up | 0.0904437454 |
| GSE28863_A3 | Up | 0.2521519467 |
| GSE28863_A4 | Up | 0.0756065388 |
| GSE48662 | Down | -0.3837557394 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-181b-5p | MIMAT0000257 | MIRT003036 | Luciferase assay/RT-PCR//Reporter assay;Other | Functional MTI | 18184693 |
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- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-181b-5p | MIMAT0000257 | 1 | hsa-miR-181b | 18184693 |
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6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
