HCSGD entry for VASP
1. General information
| Official gene symbol | VASP |
|---|---|
| Entrez ID | 7408 |
| Gene full name | vasodilator-stimulated phosphoprotein |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001843 | Neural tube closure | IEA | biological_process |
| GO:0003779 | Actin binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005522 | Profilin binding | IPI | molecular_function |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0005886 | Plasma membrane | IDA | cellular_component |
| GO:0005923 | Tight junction | IEA | cellular_component |
| GO:0005925 | Focal adhesion | IDA IEA | cellular_component |
| GO:0007411 | Axon guidance | IEA TAS | biological_process |
| GO:0008154 | Actin polymerization or depolymerization | IEA | biological_process |
| GO:0015629 | Actin cytoskeleton | TAS | cellular_component |
| GO:0017124 | SH3 domain binding | IEA | molecular_function |
| GO:0030027 | Lamellipodium | IEA | cellular_component |
| GO:0030036 | Actin cytoskeleton organization | IEA | biological_process |
| GO:0030175 | Filopodium | IEA | cellular_component |
| GO:0031258 | Lamellipodium membrane | IEA | cellular_component |
| GO:0031527 | Filopodium membrane | IEA | cellular_component |
| GO:0034329 | Cell junction assembly | TAS | biological_process |
| GO:0050852 | T cell receptor signaling pathway | TAS | biological_process |
| GO:0051289 | Protein homotetramerization | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7313335474 | 0.1666023517 | 0.9999902473 | 0.7891393127 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.5102210765 |
| GSE13712_SHEAR | Up | 0.4385483489 |
| GSE13712_STATIC | Up | 0.0437739494 |
| GSE19018 | Down | -0.4711948271 |
| GSE19899_A1 | Down | -0.3350354142 |
| GSE19899_A2 | Up | 0.1909657340 |
| PubMed_21979375_A1 | Up | 0.1637489017 |
| PubMed_21979375_A2 | Down | -0.1696399729 |
| GSE35957 | Down | -0.1296653237 |
| GSE36640 | Down | -0.1740770276 |
| GSE54402 | Up | 0.3594216745 |
| GSE9593 | Up | 0.1940667177 |
| GSE43922 | Up | 0.0156021684 |
| GSE24585 | Up | 0.0235575361 |
| GSE37065 | Down | -0.1707694092 |
| GSE28863_A1 | Down | -0.0465611316 |
| GSE28863_A2 | Down | -0.2724357997 |
| GSE28863_A3 | Up | 0.2653620143 |
| GSE28863_A4 | Up | 0.0696032957 |
| GSE48662 | Down | -0.2833466027 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-610 | MIMAT0003278 | MIRT006292 | Luciferase reporter assay//Western blot | Functional MTI | 22189055 |
| hsa-miR-193b-3p | MIMAT0002819 | MIRT016406 | Proteomics | Functional MTI (Weak) | 21512034 |
| hsa-miR-1 | MIMAT0000416 | MIRT023600 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-330-5p | MIMAT0004693 | MIRT038256 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-3615 | MIMAT0017994 | MIRT052857 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
