HCSGD entry for SHISA9

1. General information

Official gene symbolSHISA9
Entrez ID729993
Gene full nameshisa homolog 9 (Xenopus laevis)
Other gene symbolsCKAMP44
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0008328Ionotropic glutamate receptor complexISScellular_component
GO:0030054Cell junctionIEAcellular_component
GO:0032281Alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complexIEAcellular_component
GO:0032591Dendritic spine membraneISScellular_component
GO:0045202SynapseISScellular_component
GO:0048172Regulation of short-term neuronal synaptic plasticityISSbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.63881791350.87337313930.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0039407858
GSE13712_SHEARUp0.0454619427
GSE13712_STATICDown-0.0131216989
GSE19018Up0.0752913306
GSE19899_A1Up0.1537932620
GSE19899_A2Up0.1957061849
PubMed_21979375_A1Up0.0270907022
PubMed_21979375_A2Down-0.1920258218
GSE35957Up0.2548113754
GSE36640Down-0.0667704184
GSE54402Up0.0356250915
GSE9593Down-0.0167220361
GSE43922Up0.0534640290
GSE24585Down-0.1149018422
GSE37065Down-0.1195768251
GSE28863_A1Down-0.0894601933
GSE28863_A2Up0.3245750903
GSE28863_A3Up0.1036332333
GSE28863_A4Up0.0557744309
GSE48662Up0.0104253901

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.