HCSGD entry for TRPC5
1. General information
| Official gene symbol | TRPC5 |
|---|---|
| Entrez ID | 7224 |
| Gene full name | transient receptor potential cation channel, subfamily C, member 5 |
| Other gene symbols | TRP5 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005262 | Calcium channel activity | IDA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005887 | Integral component of plasma membrane | TAS | cellular_component |
| GO:0006816 | Calcium ion transport | TAS | biological_process |
| GO:0007399 | Nervous system development | TAS | biological_process |
| GO:0007411 | Axon guidance | TAS | biological_process |
| GO:0015279 | Store-operated calcium channel activity | TAS | molecular_function |
| GO:0034704 | Calcium channel complex | IDA | cellular_component |
| GO:0070679 | Inositol 1,4,5 trisphosphate binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8746346491 | 0.2255469815 | 0.9999902473 | 0.9134670103 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0422183058 |
| GSE13712_SHEAR | Down | -0.2199018461 |
| GSE13712_STATIC | Up | 0.1651289181 |
| GSE19018 | Down | -0.1609611397 |
| GSE19899_A1 | Up | 0.1211339020 |
| GSE19899_A2 | Down | -0.1656126227 |
| PubMed_21979375_A1 | Up | 0.0764033909 |
| PubMed_21979375_A2 | Down | -0.1562649847 |
| GSE35957 | Up | 0.1541912773 |
| GSE36640 | Down | -0.7181203613 |
| GSE54402 | Down | -0.7417539886 |
| GSE9593 | Down | -0.1248156600 |
| GSE43922 | Down | -0.1868538918 |
| GSE24585 | Up | 0.2912323788 |
| GSE37065 | Down | -0.1025632545 |
| GSE28863_A1 | Down | -0.1206652412 |
| GSE28863_A2 | Down | -0.0007104799 |
| GSE28863_A3 | Up | 0.2214494392 |
| GSE28863_A4 | Up | 0.0888049437 |
| GSE48662 | Up | 0.0359453224 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-29b-2-5p | MIMAT0004515 | MIRT038711 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
