HCSGD entry for TRO
1. General information
| Official gene symbol | TRO |
|---|---|
| Entrez ID | 7216 |
| Gene full name | trophinin |
| Other gene symbols | MAGE-d3 MAGED3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0005886 | Plasma membrane | TAS | cellular_component |
| GO:0005887 | Integral component of plasma membrane | TAS | cellular_component |
| GO:0007156 | Homophilic cell adhesion | TAS | biological_process |
| GO:0007566 | Embryo implantation | TAS | biological_process |
| GO:0030308 | Negative regulation of cell growth | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9990653053 | 0.0009232020 | 0.9999902473 | 0.0573103774 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1492074990 |
| GSE13712_SHEAR | Down | -1.5175753619 |
| GSE13712_STATIC | Down | -1.8986163439 |
| GSE19018 | Down | -0.0588447781 |
| GSE19899_A1 | Down | -0.0635439584 |
| GSE19899_A2 | Down | -1.4836948029 |
| PubMed_21979375_A1 | Down | -1.9465298723 |
| PubMed_21979375_A2 | Down | -0.6191214663 |
| GSE35957 | Down | -0.8500190271 |
| GSE36640 | Down | -0.7719382944 |
| GSE54402 | Down | -0.2885253937 |
| GSE9593 | Down | -0.4542919352 |
| GSE43922 | Down | -0.7219678416 |
| GSE24585 | Up | 0.2422607539 |
| GSE37065 | Down | -0.1639299004 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Down | -0.4988593626 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-183-5p | MIMAT0000261 | MIRT047116 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
