HCSGD entry for TPBG
1. General information
| Official gene symbol | TPBG |
|---|---|
| Entrez ID | 7162 |
| Gene full name | trophoblast glycoprotein |
| Other gene symbols | 5T4 5T4AG M6P1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005783 | Endoplasmic reticulum | IEA | cellular_component |
| GO:0005887 | Integral component of plasma membrane | TAS | cellular_component |
| GO:0007155 | Cell adhesion | NAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0287093499 | 0.1471856084 | 0.3931627471 | 0.7414492632 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1877734481 |
| GSE13712_SHEAR | Down | -0.4312707715 |
| GSE13712_STATIC | Down | -0.7467941438 |
| GSE19018 | Up | 1.6805768037 |
| GSE19899_A1 | Up | 0.1824432628 |
| GSE19899_A2 | Down | -0.0460034410 |
| PubMed_21979375_A1 | Up | 0.1275622366 |
| PubMed_21979375_A2 | Down | -0.0869051076 |
| GSE35957 | Up | 0.0133183295 |
| GSE36640 | Down | -0.3549360133 |
| GSE54402 | Down | -0.2661475785 |
| GSE9593 | Up | 0.1886491812 |
| GSE43922 | Up | 0.6221126136 |
| GSE24585 | Up | 0.5836168175 |
| GSE37065 | Down | -0.0080403314 |
| GSE28863_A1 | Up | 0.7470562027 |
| GSE28863_A2 | Up | 0.8713243404 |
| GSE28863_A3 | Down | -0.5580511761 |
| GSE28863_A4 | Down | -0.2516937718 |
| GSE48662 | Down | -0.5566761460 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-155-5p | MIMAT0000646 | MIRT020868 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-30a-5p | MIMAT0000087 | MIRT028555 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031878 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT032386 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-505-3p | MIMAT0002876 | MIRT041063 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
