HCSGD entry for TNR

1. General information

Official gene symbolTNR
Entrez ID7143
Gene full nametenascin R
Other gene symbolsTN-R
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005576Extracellular regionTAScellular_component
GO:0005578Proteinaceous extracellular matrixIEAcellular_component
GO:0005634NucleusIDAcellular_component
GO:0005730NucleolusIDAcellular_component
GO:0005737CytoplasmIDAcellular_component
GO:0007155Cell adhesionNASbiological_process
GO:0007158Neuron cell-cell adhesionIEAbiological_process
GO:0007411Axon guidanceNASbiological_process
GO:0008306Associative learningIEAbiological_process
GO:0009986Cell surfaceIEAcellular_component
GO:0022029Telencephalon cell migrationIEAbiological_process
GO:0022408Negative regulation of cell-cell adhesionIEAbiological_process
GO:0030198Extracellular matrix organizationTASbiological_process
GO:0035641Locomotory exploration behaviorIEAbiological_process
GO:0045121Membrane raftIEAcellular_component
GO:0048692Negative regulation of axon extension involved in regenerationIEAbiological_process
GO:0050805Negative regulation of synaptic transmissionIEAbiological_process
GO:0050808Synapse organizationIEAbiological_process
GO:0050885Neuromuscular process controlling balanceIEAbiological_process
GO:0051968Positive regulation of synaptic transmission, glutamatergicIEAbiological_process
GO:0060291Long-term synaptic potentiationIEAbiological_process
GO:0072534Perineuronal netIEAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.91440874590.65917237570.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0153868489
GSE13712_SHEARUp0.0446326636
GSE13712_STATICDown-0.1134129243
GSE19018Down-0.0245798846
GSE19899_A1Up0.0434936160
GSE19899_A2Up0.0876366816
PubMed_21979375_A1Down-0.2580313184
PubMed_21979375_A2Up0.0105519312
GSE35957Up0.1430391793
GSE36640Down-0.0180007772
GSE54402Down-0.0888890013
GSE9593Up0.0273898122
GSE43922Up0.0102069328
GSE24585Down-0.1265700450
GSE37065Down-0.0395374790
GSE28863_A1Down-0.0251054536
GSE28863_A2Down-0.0596059278
GSE28863_A3Up0.0547733998
GSE28863_A4Up0.1258318136
GSE48662Up0.0007457349

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.