HCSGD entry for CLEC3B

1. General information

Official gene symbolCLEC3B
Entrez ID7123
Gene full nameC-type lectin domain family 3, member B
Other gene symbolsTN TNA
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0001501Skeletal system developmentIEAbiological_process
GO:0001503OssificationIEA IEPbiological_process
GO:0001652Granular componentIDAcellular_component
GO:0005509Calcium ion bindingIDAmolecular_function
GO:0005576Extracellular regionNAScellular_component
GO:0005615Extracellular spaceIDAcellular_component
GO:0005737CytoplasmIDAcellular_component
GO:0008201Heparin bindingIDAmolecular_function
GO:0010756Positive regulation of plasminogen activationISSbiological_process
GO:0030246Carbohydrate bindingIEAmolecular_function
GO:0030282Bone mineralizationIDA IEPbiological_process
GO:0031012Extracellular matrixISScellular_component
GO:0036143Kringle domain bindingIPImolecular_function
GO:0071310Cellular response to organic substanceIEPbiological_process
GO:0071560Cellular response to transforming growth factor beta stimulusIEPbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.02317787700.99655689370.36248266031.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954--
GSE13712_SHEAR--
GSE13712_STATIC--
GSE19018--
GSE19899_A1--
GSE19899_A2--
PubMed_21979375_A1--
PubMed_21979375_A2--
GSE35957--
GSE36640--
GSE54402--
GSE9593--
GSE43922--
GSE24585--
GSE37065--
GSE28863_A1Up0.5855827669
GSE28863_A2Up0.2364785496
GSE28863_A3Down-0.2175627139
GSE28863_A4Up0.1400267524
GSE48662Up1.6282551541

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Name

Drug

Accession number

TenecteplaseDB00031 BTD00019 | BIOD00019

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-335-5pMIMAT0000765MIRT017731MicroarrayFunctional MTI (Weak)18185580
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.