HCSGD entry for TMOD1
1. General information
| Official gene symbol | TMOD1 |
|---|---|
| Entrez ID | 7111 |
| Gene full name | tropomodulin 1 |
| Other gene symbols | D9S57E ETMOD TMOD |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003779 | Actin binding | IEA | molecular_function |
| GO:0005523 | Tropomyosin binding | IEA | molecular_function |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0005856 | Cytoskeleton | IEA | cellular_component |
| GO:0008180 | COP9 signalosome | IDA | cellular_component |
| GO:0008344 | Adult locomotory behavior | IEA | biological_process |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0030016 | Myofibril | IEA | cellular_component |
| GO:0030049 | Muscle filament sliding | TAS | biological_process |
| GO:0030239 | Myofibril assembly | IEA | biological_process |
| GO:0030863 | Cortical cytoskeleton | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0387839330 | 0.3694186353 | 0.4442262402 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2476411486 |
| GSE13712_SHEAR | Down | -1.5042547524 |
| GSE13712_STATIC | Up | 0.0770264785 |
| GSE19018 | Down | -0.1930873331 |
| GSE19899_A1 | Down | -0.0062471162 |
| GSE19899_A2 | Down | -1.0303966972 |
| PubMed_21979375_A1 | Up | 0.7319610362 |
| PubMed_21979375_A2 | Up | 0.1830988951 |
| GSE35957 | Up | 0.0504285823 |
| GSE36640 | Up | 3.4772605066 |
| GSE54402 | Down | -0.4451223061 |
| GSE9593 | Down | -0.0273772442 |
| GSE43922 | Up | 1.1481027334 |
| GSE24585 | Down | -0.0326435163 |
| GSE37065 | Up | 1.7212453064 |
| GSE28863_A1 | Up | 0.0121607943 |
| GSE28863_A2 | Down | -0.0796093102 |
| GSE28863_A3 | Up | 0.0137167520 |
| GSE28863_A4 | Up | 0.0454516595 |
| GSE48662 | Up | 0.0847206253 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
