HCSGD entry for TSPAN6
1. General information
| Official gene symbol | TSPAN6 |
|---|---|
| Entrez ID | 7105 |
| Gene full name | tetraspanin 6 |
| Other gene symbols | T245 TM4SF6 TSPAN-6 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004871 | Signal transducer activity | IMP | molecular_function |
| GO:0007165 | Signal transduction | IMP | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0043123 | Positive regulation of I-kappaB kinase/NF-kappaB signaling | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1655912427 | 0.4818191748 | 0.8050474880 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.5594213254 |
| GSE13712_SHEAR | Down | -0.3508453224 |
| GSE13712_STATIC | Down | -0.4138872391 |
| GSE19018 | Down | -0.3105557715 |
| GSE19899_A1 | Up | 0.3069374620 |
| GSE19899_A2 | Down | -0.4856006005 |
| PubMed_21979375_A1 | Down | -0.0635276107 |
| PubMed_21979375_A2 | Up | 0.2228256278 |
| GSE35957 | Up | 0.0616076569 |
| GSE36640 | Up | 0.3777378467 |
| GSE54402 | Down | -0.1698893249 |
| GSE9593 | Up | 0.6284719831 |
| GSE43922 | Down | -0.0231231020 |
| GSE24585 | Up | 0.0843613047 |
| GSE37065 | Up | 0.1954467199 |
| GSE28863_A1 | Up | 0.1442784546 |
| GSE28863_A2 | Up | 0.4512380961 |
| GSE28863_A3 | Down | -0.4924055356 |
| GSE28863_A4 | Up | 0.0951994274 |
| GSE48662 | Up | 0.0884992026 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-145-5p | MIMAT0000437 | MIRT021536 | Reporter assay;Microarray | Functional MTI | 21351259 |
| hsa-miR-142-3p | MIMAT0000434 | MIRT021618 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-132-3p | MIMAT0000426 | MIRT021861 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-128-3p | MIMAT0000424 | MIRT021978 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022561 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-484 | MIMAT0002174 | MIRT042158 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
