HCSGD entry for TGM4

1. General information

Official gene symbolTGM4
Entrez ID7047
Gene full nametransglutaminase 4
Other gene symbolsTGP hTGP
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003810Protein-glutamine gamma-glutamyltransferase activityNASmolecular_function
GO:0018149Peptide cross-linkingIEAbiological_process
GO:0042628Mating plug formationIEAbiological_process
GO:0046872Metal ion bindingIEAmolecular_function
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.46561822120.95100144370.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0354103444
GSE13712_SHEARUp0.3130363783
GSE13712_STATICUp0.2234884973
GSE19018Up0.1648535809
GSE19899_A1Up0.1236144184
GSE19899_A2Up0.2074226474
PubMed_21979375_A1Up0.0392927861
PubMed_21979375_A2Down-0.1189157806
GSE35957Up0.0986042906
GSE36640Down-0.0313947711
GSE54402Up0.0188340879
GSE9593Up0.1538192520
GSE43922Up0.0138779151
GSE24585Up0.0911437063
GSE37065Down-0.0299337070
GSE28863_A1Up0.0046692107
GSE28863_A2Up0.0717723144
GSE28863_A3Up0.0416725222
GSE28863_A4Up0.0545257382
GSE48662Up0.0443217655

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.